Skip to content
#

protein-interaction-network

Star

Here are 6 public repositories matching this topic...

Language: All
Filter by language
All 6 Jupyter Notebook 3 Python 2 R 1

NIGMS / Protein-Protein-Interactions-using-ML

Star 2

In this module, you will harness novel machine learning techniques to investigate how proteins behave. A special focus will be given to data preprocessing, model training, and evaluation techniques to uncover complex biological relationships

machine-learning random-forest structural-biology gcp molecular-dynamics computational-biology pymol drug-discovery logistic-regression protein-protein-interaction molecular-visualization sars-cov-2 protein-interaction-network biophysical-simulations
  • Updated Mar 17, 2026
  • Jupyter Notebook

romanbaptista / lincs-embedding

Star 0

End‑to‑end pipeline for generating context‑aware drug embeddings from LINCS L1000 using RNA‑seq preprocessing, STRING PPI networks, and GNNs, with UMAP visualisation and drug‑class neighbourhood analysis.

bioinformatics rna-seq systems-biology computational-biology gene-expression drug-discovery umap data-pipeline network-biology graph-neural-networks pytorch-geometric gnn protein-interaction-network string-db lincs-l1000
  • Updated May 14, 2026
  • Jupyter Notebook

Add this topic to your repo

To associate your repository with the protein-interaction-network topic, visit your repo's landing page and select "manage topics."

Learn more