seqera

Metro-map-style SVG diagrams from Mermaid graph definitions, designed for visualizing bioinformatics pipeline workflows

Pipeline to aggregate pertinent metrics across pipeline runs on the Seqera Platform

Self-hosted Nextflow Tower replacement — receive -with-tower trace events, track run progress, and launch pipelines without a Seqera Platform subscription

Bisulfite sequencing with pinned nf-core/methylseq on local Docker, Slurm, or AWS Batch, plus a layer that turns Bismark output into a beta table, QC, and plots. Shown on RRBS of colorectal tumor and normal (GSE95654). Nextflow, AWS CDK, Seqera Platform.