tool for continuously integrated meta-resource
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Mar 25, 2021 - Python
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twas
Here are 6 public repositories matching this topic...
A generalized pipeline for evaluating variant effect predictors by using their scores as biological priors in TWAS/PWAS
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Aug 24, 2026 - Python
End-to-end TWAS pipeline for Alzheimer's disease integrating Kunkle et al. (2019) GWAS summary statistics with GTEx v8 MASHR brain eQTL models to identify causal genes via cross-tissue omnibus regression and functional pathway over-representation analysis.
gwas gene-expression gtex alzheimers-disease eqtl summary-statistics neurogenomics twas genome-wide-association-study brain-tissue neurodegenerative-disease transcriptome-wide-association-study spredixcan smultixcan metaxcan cross-tissue-analysis mashr predictdb snp-harmonization
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Jun 9, 2026 - Python
Proof-governed Agent Skill for Mendelian randomization, shared genetics, claim boundaries, manuscript QA, and submission handoff.
gwas causal-inference codex colocalization scientific-writing twas genetic-epidemiology mendelian-randomization biomedical-research agent-skills
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Aug 17, 2026 - Python
RAISING: Automated deep learning framework
python gwas deep-neural-networks deep-learning genomics feature-selection supervised-learning natural-selection gea twas autodl raising raising-software polygenic-adaptation
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Nov 25, 2024 - Python
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