atac

R toolkit for the analysis of single-cell chromatin data

Analysis of epigenetic data in Python

Pipeline for HiCAR data, a robust and sensitive multi-omic co-assay for simultaneous measurement of transcriptome, chromatin accessibility and cis-regulatory chromatin contacts.

Differential accessibility and time-course analysis for ATAC-seq data, with likelihood-ratio tests, gaussian process regression and optional motif analysis and footprinting.

A wavelet-based linear programming method using L1-minimal reconstruction loss for accessible chromatin data deconvolution

Live arrivals, timetables, line maps and a journey planner for Rome public transport. Unofficial, no accounts, no tracking.

🎵 Stream Radio ATAC directly in your Discord Server 🎵

Functions for QC and analysis of ATAC-seq data

A telegram bot to get information on Rome's public transportation.

Open data ingestion system that gets the position of every bus currently working in Rome, their route and next stop. Ran with AWS Lambda and Athena.

Clustering motif models to remove redundancy