epidemiology-analysis

Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.

Epidemiology analysis package

Stochastic SIR models; adding age-structures and social contact data for the spread of covid-19. Lattice model for identifying and isolating hotspots. This has been further developed into a network(graph) of multiple clusters(lattices) and tracing the infection in such a population.

MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling

Burden of Disease Calculator - a Shiny app for computing DALYs and economic burden of disease

🌏🌎🌍 Liberate Google Takeout location data for epidemiological research and local contact tracing https://epi-collect.org

Info/Data (global/italy) about COVID-19. PR welcome for other countries.

Data analysis for colorectal cancer projects, mainly using metabolomics data.

Syllabus, schedule, and data for EPIB 704 course at McGill University

Curso Intermediário de R para análise de situação de saúde

Game theoretical modelling of COVID-19 vaccine adoption

rifttable: Results Tables to Bridge the Rift Between Epidemiologists and Their Data

Network data analysis using networkx, and gephi for visualisations.

Genomic Epidemiology of SARS-CoV-2 in Pakistan

Code for paper by Corbett, Schongalla, and Moen, about relationships between firearm ownership rates, mental health provider density, and firearm fatality rates.

Clinical cohort data, from raw file to reproducible evidence: data quality, an analysis population with its participant flow, multiple imputation pooled with Rubin's rules, survival models and a Word study dossier. Local-first, open source.

Projeto de machine learning para predição de taxas de internação por CSAB e clusterização para dimensionamento de ESF.

A SEIRS-NIMFA compartmental epidemiological model implementation adapted for the analysis of IoT network malware propagation

Data analysis focusing on health problems

Data analysis and modeling of the COVID-19 propagation dynamics